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Bioinformatics by Nakaya Helder
This page covers the following topics related to Bioinformatics : Text Mining Gene Selection to Understand Pathological Phenotype Using Biological Big Data, Single-Cell RNA Sequencing Procedures and Data Analysis, Computational Methods for Detecting Large-Scale Structural Rearrangements in Chromosomes, Machine Learning Approaches for Biomarker Discovery Using Gene Expression Data, Bayesian Inference of Gene Expression, Comprehensive Evaluation of Error-Correction Methodologies for Genome Sequencing Data, Plant Transcriptome Assembly: Review and Benchmarking,WeMine Aligned Pattern Clustering System for Biosequence Pattern Analysis, Rational Design of Profile Hidden Markov Models for Viral Classification and Discovery, Pattern Discovery and Disentanglement for Aligned Pattern Cluster Analysis and Protein Binding Complexes Detection.
Author(s): Nakaya Helder I., PhD.
NA Pages
Foundations of Bioinformatics and Systems Biology
The contents in this site includes the following topics : The complete course is comprised of three modules covering Foundations of Bioinformatics, Statistics in Bioinformatics, Systems Biology. These modules holds the following contents : Introduction to bioinformatics, Sequence Alignment and Database Searching, Structural Bioinformatics, Genome Informatics: High Throughput Sequencing Applications and Analytical Methods, Approaches to statistical estimation and testing, Statistical estimation and hypothesis testing, Analyses involving associations, Pearson correlation, t-test, and log odds ratios, Linear regression, Regression models, Introduction to graphical methods for multivariate data analysis, Clustering and principal component analysis, Introduction to systems biology, Epigenome data mining to understand disease predisposition, Computational clinical decision support systems, Application of systems biology to translational medicine.
Author(s): University of Michigan
NA Pages
Micorarray Methodology and Analysis
This site hold 9 lectures on various topics related to Micorarray Methodology and Analysis such as Introduction to microarray technology, Image Processing for Pedestrians, Differential Expression, Microarray Normalization, Clustering and Classification, etc.
Author(s): M. Saleet Jafri, Program in Bioinformatics and Computational Biology, George Mason University
NA Pages
A Bioinformatics Study of Human Transcriptional Regulation
This PDF thesis A Bioinformatics Study of Human Transcriptional Regulation covers the following topics related to Bioinformatics : Biological background, DNA and chromosomes, Transcription, Transcriptional regulation, Medical aspects of transcriptional regulation, High-throughput technologies, DNA microarrays, Massively parallel sequencing, Biological knowledge sources, Annotations, Experimental data, Aims, Methods, Computational methods, Statistics Randomization, Local search, Analysis of high-throughput data, Experiment design, Expression analysis, ChIP-chip data analysis, ChIP-seq data analysis, Data storage and management, Results and discussion, Summary of results, Computational results, Biological results, Medical results, Additional results, Discussion.
Author(s): Adam Ameur
54 Pages
Bioinformatics Sequence Analysis and Phylogenetics Lecture Notes (PDF 190P)
This book covers the following topics: biological basics needed in bioinformatics, Pairwise Alignment, Multiple Alignment, Phylogenetics, DNA, RNA, Transcription, Introns, Exons, and Splicing, Amino Acids.
Author(s): Sepp Hochreiter
180 Pages
Bioinformatics II Theoretical Bioinformatics and Machine Learning (PDF 394)
This book covers the following topics: Machine Learning in Bioinformatics, Theoretical Background of Machine Learning, Support Vector Machines, Error Minimization and Model Selection, Neural Networks, Bayes Techniques, Feature Selection, Hidden Markov Models.
Author(s): Sepp Hochreiter
400 Pages
Introducing Bioinformatics Concepts in CS1
This note explains the basic bioinformatics concepts via a closed lab exercise and a programming project. Also discusses the implementation of these activities and some of the results/lessons we learned.
Author(s): Erica Eddy
9 Pages
Currently this section contains no detailed description for the page, will update this page soon.
Author(s): NA
NA Pages
Online Lectures on Bioinformatics
Currently this section contains no detailed description for the page, will update this page soon.
Author(s): NA
NA Pages
Basic bioinformatics concepts, databases and tools
Currently this section contains no detailed description for the page, will update this page soon.
Author(s): NA
NA Pages
