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This note covers the following topics: Structural Biology and Amino acids, History of Macromolecular Crystallography, Amino acid Chirality, Non-covalent interactions and Ramachandran Map, Secondary structures; Introduction to Protein , Alpha-domain proteins I: Coiled coils and four-helix bundle, ROP protein design, Alpha-domain proteins II: Large alpha-helical domain and globin fold, Alpha or Beta-domain proteins, Beta-domain proteins.
Author(s): Dr. R. Sankararamakrishnan
NAPages
This note explores the concepts and algorithms that enable computational modeling of biological molecules, in both theory and practice. Topics covered includes: The basics of protein structure, Rosetta and structural modeling, Optimization techniques, Analysis of protein structures and assessment of model quality, Full atom refinement and side chain modeling, Hands-on: Side chain modeling, Homology modelin, Protein-protein docking.
Author(s): Prof. Ora Furman
NAPages
These are notes about using mathematics to study the molecular structure of molecules, especially long organic molecules like DNA and proteins. Topics covered includes: Molecular Genetics: DNA, Proteins, Frames and moving frames, Orthogonal transformations and Rotations, Torsion angles and pdb files, X-ray Crystallography, Lattices, and Fourier Series, Nuclear Magnetic Resonance and distance geometry, Protein Folding.
Author(s): J. R. Quine
86Pages
This book combines a general overview of diffraction methods with a step-by-step description of the process of a single-crystal X-ray structure determination experiment, from chemical synthesis or expression to phasing and refinement, analysis and quality control . Topics covered includes: Major techniques in structural biology, X-ray fiber diffraction, Electron diffraction, Electron microscopy, Neutron diffraction, Nuclear magnetic resonance spectroscopy, Single crystal X-ray crystallography.
Author(s): Martin Egli
NAPages
The aim of this book is that a non expert can gain some appreciation for the intricacies involved, and in the current state of affairs. The expert meanwhile, can gain a deeper understanding of the topic.
Author(s): Eshel Faraggi
396Pages
This note covers the following topics: Principles of protein structure, Hemoglobin, Platelet adhesion to collagen and Blood clotting.
Author(s): Utrecht University
NAPages
